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180 Cards in this Set

  • Front
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Healthcare-associated infections

a local or systemic infection acquired at a healthcare facility




aka nosocomical infection




some acquired from patients, some hospital personnel

direct detection of pathogens

some pathogens can be readily identified by microscopic examination of tissue samples


ex: Neisseria Gonorrhoeae

minimum inhibitory concentration (MIC)

procedure for antibiotic susceptibility testing employs an antibiotic dilution assay




wells containing serial dilutions of antibiotics are inoculated with a standard amount of a test organism




look for inhibited growth

disc diffusion test

standard procedure for assessing antimicrobial activity




agar media is spread evenly with culture of bacteria




where the antibiotic is, microbes should die

inhibition zones

used to determine an organisms susceptibility to an antimicrobial agent

e-test

a non-diffusion based technique that employs a performed and predefined gradient of an antimicrobial agent immobilized on a plastic strip

how do clinicians often identify an infection?

measure the patients antibody titer (quantity) against antigens produced by the pathogenq

what tests do clinicians use to identify an infection?

agglutination and EIA




skin testing too

serology

the study of antigen-antibody reactions in vitro

specificity

ability of an antibody preparation to recognize a single antigen

sensitivity

defines the lowest amount of an antigen that can be detected

agglutination

the visible clumping of a particulate antigen when mixed with antibodies specific for the particulate antigens




simple to perform, specific, inexpensive, rapid and sensitive




standardized tests are used to identify blood group antigens and many pathogens and pathogen products

direct aggluatnation

result when soluble antibody causes clumping due to interaction with antigen that is an integral part of the surface of the cell or other insoluble particle




used for the classification of antigens found on the surface of red blood cells

passive agglutination

the agglutination of soluble antigens or antibodies that have been absorbed or chemical coupled to cells of insoluble particles (ex: latex beads, charcoal)




reactions can be up to 5 times more sensitive than direct tests

enzyme immunoassay (EIA) or enzyme linked immunosorbent assay (ELISA)

very sensitive immunological assay




widely used in clinical diagnostic and research applications




EIAs employ covalently bonded enzymes attached to antibody molecules




rapid tests are similar to EIAs




both allow detection of antigen-antibody complexes

four different EIA methodologies

direct, indirect, sandwich, combination

direct EIA

detection of antigen

indirect EIA

detection of antibody

sandwich EIA

detection of antibody

combination EIA

combo of direct EIA and sandwich EIA

rapid tests

reagent are absorbed to support material




bodily fluid is applied to support matrix




color forms when concentration of chromophore gets high enough

rapid text matrix

contains soluble antigen conjugated to a color molecule (chromophore)




also contains a line of fixed antigens




antibodies bind to antigens

chromophore

colored molecule conjugated to a soluble antigen

immunoblot (western blot)

electrophoresis of proteins, followed by a transfer to a membrane and detection by addition of specific antibodies




detects antibodies to specific antigens or the antigens themselves

polymerase chain reaction (PCR)

presence of amplified gene segment confirms presence of pathogen




reverse transcriptase PCR, quantitative real-time PCR

reverse transcriptase PCR (RT-PCR)

uses pathogen specific RNA to make cDNA

quantitative real-time PCR (qPCR)

uses fluorescently labeled PCR products




almost immediate results

mannitol salt media

selective for staphylococci differential mannitol fermenters yellow (acidification)

MacConkey

selective for gram positive differential for lactose fermentation

blood

selective for gram positive cocci differential for streptococci based on hemolysis

eosin-methylene blue

selective for gram negative differential for lactose or sucrose fermentation

immunotherapy

aka biologic therapy




type of cancer treatment designed to boost body's natural defenses to fight cancer




uses substances either made by the body or in a lab to improve/restore immune system function

emerging antibiotic threats

in US, 2 million infection/year




23,000 ppl die from these infections




clostridium difficile




poor prescribing practices by physicians. half of all antibiotic prescriptions do not meet current guidelines for antibiotic use

clostridium difficile

a hospital acquired infection that is often caused by antibiotic use, 250,000 americans/year

colistin

polypeptide antibiotic makes holes in bacterial membrane




isolated in 1950's




not used much due to human nephrotoxicity

polymyxin antibiotics

mechanisms of action:




target: bacterial cell membrane




binding with bacterial membrane occurs through electrostatic interactions between cationic polypeptide (colistin) and anionic lipopolysaccharide (LPS) molecules in outer membrane of gram negative bacteria




leads to a derangement of the cell membrane




the result of this is an increase in permissibility of cell envelope, leakage of cell contents, and subsequent cell death

antimicrobial drugs are classified on basis of:

molecular structure, mechanisms of action, spectrum of antimicrobial activity

sulfa drugs:

discovered by Gerhard Domagk in the 1930's




inhibit the growth of bacteria (sulfanilamide is the simplest)




high therapeutic index




folate/prenatal vitamins

isoniazid

a growth analog effective only against mycobacterium




interferers with synthesis of mycolic acid

quinolones

antibacterial compounds that interfere with DNA gyrase (ciprofloxacin)

antibiotics

naturally produced antimicrobial agents




fewer than 1% known antibiotics are clinically useful


can be modified to enhance efficacy (semisynthetic)

semisynthetic

the ability of modifying an antibiotic to enhance its efficacy

broad spectrum antibiotics

effective against both positive and negative gram bacteria

b-lactam

antibiotics are one of the most important groups of antibiotics of all time


include penicillins and cephlosporins


over half of all antibiotics used worldwide

penicillins

disovered by alexander fleming




effective primarily against gram positive bacteria




some synthetic forms are effective against some gram negative bacteria




target cell wall synthesis

cephalosporins

produced by fungus cephalosporium




same mode of action as the penicillins




broader spectrum of activity than penicillins




resistant to enzymes that destroy b-lactam ring




commonly used to treat gonorrhea

aminoglycosides

antibiotics that contain amino sugars bonded by glycosidic linkage


ex: kanamycin, neomycin, amikacin




not commonly used today


used when others fail

antiviral drugs

target host structures resulting in toxicity




most successful and commonly used antivirals are the nucleoside analogs (AZT)




nonnucleoside reverse transcriptase inhibitors (NNRTI)

AZT

block reverse transcriptase and production of viral DNA




aka nucleoside reverse transcriptase inhibitors

nonnucleoside reverse transcriptase inhibitors (NNRTI)

bind directly to RT and inhibit reverse transcription

protease inhibitors

inhibit the processing of large viral proteins into individual components

fusion inhibitors

prevent viruses from successfully fusing with the host cell

interferons

small proteins that prevent viral multiplication by stimulating antiviral proteins in uninfected cells

neuraminidase inhbitiors (Tamiflu, relenza)

successfully limits influenza infection

antimicrobial drug resistance

the acquired ability of a microorganism to resist the effects of a chemotheraputic agent to which it is normally sensitive

5 reasons that microogranisms are naturally resistant to certain antibiotics

organism is impermeable to antibiotic




organism can inactivate the antibiotic




organism may modify the target of the antibiotiv




organisms may develop a resistant biochemical pathway




organisms may be able to pump out all the antibiotic (efflux)

r plasmid

most drug resistant bacteria isolated from patients contains drug resistant genes located here.




evidence that they predate the antibiotic era




use of antibiotics in medicine, vet medicine and agriculture selects for the spread of them

epidemiology

the study of the occurrence, distribution, and determinants of health and disease in a population

epidemic

when a disease occurs in a large number of people in a population at the same time

pandemic

widespread, usually worldwide

endemic

constantly present disease in a population, usually low incidences

incidence

the number of new cases of the disease in a given period of time

prevalence

total number of new and existing cases in a population in a given time

outbreak

occurs when a number of cases of a disease are reported in a short period of time

subclinical infections

diseased individuals who show no/mild symptoms

mortality

the incidence of death in a population

morbidity

the incidence of disease, including fatal and nonfatal

disease progression

infection, incubation period, acute period, decline period, convalescent period

infection

the organism invades and colonizes host

incubation period

the time between infection and onset of symptoms

acute period

disease is at its height

decline period

disease symptoms are subsiding

convalenscent period

patient regains strength and returns to normal

herd immunity

resistance of a group to infection due to immunity of a high portion of the group

direct host to host transmission

infected individual transmits a disease directly to a susceptible host without the assistance of an intermediary (Ex: flu, common cold, STD, ringworm)

indirect host to host transmission

occurs when transmission is facilitated by a living or nonliving agent



living agent

vector

non living agent

formites

common source epidemics

usually arises from contamination of water/food (ex: cholera)

host to host epidemics

the disease shows a slow, progressive rise and a gradual decline (ex: influenza and chicken pox)

reservoirs

sites in which infections agents remain viable and from which individuals can become infected

zoonosis

any disease that primarily infects animals but it occasionally transmitted to humans


control may not eliminate the disease a a potential public health problem


carriers

pathogen infected individuals showing no signs of clinical disease




potential sources of infection




may be individuals in the incubation period of the disease or asymptomatic




can be identified using diagnostic techniques, including culture and immunoassays




typhoid mary is an example of a carrier

control directed against the reservoir

if its an animal, can be immunized or destroyed




when humans are the reservoir, eradication can be difficult


those w disease can be quarantined, immunized and treated




used by the WHO to eradicate small pox

immunization

diseases have been controlled using immunization




ex: small pox, rubella, tetanus

quarantine

restricts the movement of an individual with an active infection

controls against transmission of pathogen

surveillance, pathigen eradication

surveilance

the observation, recognition, and reporting of diseases

pathogen eradication

goal is to temove all of a pathogen from any reservoir (smallbox, polio, potentially rabies, leprosy and others)

emerging factors of infectious disease

human demographics and behavior, technology and industry, economic development and land use, internaltional travel and change, breakdown of public health measures, abnormal natural occurances

tuberculosis

worldwide infectious disease of humans




incidence is increasing




transmitted by airborne droplets




cell mediated immunity plays a critical role in the prevention of active disease after infection




classified as a primary infection or postprimary infection

initial

primary infection

reinfection

postprimary infection

primary infection with tb

hypersensitizes the patient to the bacteria and alters the individuals response to subsequent exposure




hypersensitivity measured by diagnostic skin test

postprimary infection

chronic tb often results in the gradual spread of tubercular lesions in the LUNGS

spread of tb prevented by

hospitalization of patients in negative pressure rooms




use of face masks for healthcare workers

treatment for tb

antimicrobial therapy




isoniazid: growth fator analog nicotinamide




treatment usually requires a 9 month regime




affects the synthesis of mycolic acid and mycobacteria

hansen's disease (leprosy)

m. leprae is the causative agent




armadillo is the only experimental animal that has been successfully use to grow




most serious form is characterized by folded, bulblike lesions on the body

pathogenicity of m leprae

due to a combination of delayed hypersensitivity and the invasiveness of the organism




tramission is by both direct contact and respiratory routes




incubation times vary from severl weeks to years




the incidence of leprosy worldwide is low

meningitis

inflammation of the meninges


membranes that line the central nervous system, especially the spinal cord and brain




can be viral, bacterial, fungal, or protist infection

neisseria meningitides

normal part of microbiome




gram negative, nonsporulating, obligately aerobic, oxidase-positive encapsulated dipolococcus




causes one type of infectious bacterial meningitis and a related infection, meningococcemia




13 pathogenic strains are recognized based on antigenic differences in their capsular polysaccarides

Meningococcal meningitis

Often? (can 95% don’t )occurs in epidemics, usually in closed populations




Typically affects older school-age children and young adults


- Transmission is typically via airborne routes


-Treatment is usually penicillin G


-Incidence has decreased in recenty ears due to widespreadvaccination in susceptible populations


– Meningococcemia blood infection without Brain/CNSinvolvement

most prevalent human infections are causedby

viruses

most viral diseases

are acute, self limiting infections

viruses are ______ easily controlled by chemotheraputic methods

less

few serious viruses have been effectively controlled by vaccination

small pox and rabies

measles (rubeola or 7-day measles)

often affects suseptible children as an acute, highly infectious, often epidemic disease




caused by paramyxovirus




virus enters the nose and throat by airbourne transmission




used to be common childhood illness




now only occurs in rather isolated outbreaks


due to widespread immunizatin programs




2014 outbreak imported and unvaccinated

paramyxovirus

negative strand RNA virus

mumps

Caused by a paramyxovirus (like measles)




Highly infectious




Spread by airborne droplets




Characterized by inflammation of the salivaryglands

Rubella (German measles or 3-day measles)

Caused by a positive-strand RNA virus of the togavirus group




Disease symptoms resemble measles but aregenerally milder and less contagious




Routine childhood immunization is practiced inthe U.S.




MMR

Chickenpox(varicella)

F16310CH29P2PII Common childhood disease characterized by a systemic papular rash




Caused by varicella-zoster virus (VZV), aherpesvirus




VZV is highly contagious and transmitted byinfectious droplets




A vaccine is presently used in the U.S.




VZV virus establishes a lifelong latent infection innerve cells




The virus occasionally migrates to the skin surface,causing a painful skin eruption (shingles)

colds

The most common of infectious diseases


– Viral infections transmitted via airbornedroplets


– Infections are usually of short duration


– Symptoms milder than other respiratorydiseases


– Symptoms include rhinitis, nasal obstruction,watery nasal discharges, and malaise

The Common Cold

– Commonly caused by rhinoviruses


• Positive-sense, single-stranded RNA viruses


• Nearly 115 different strains identified


– Approximately 15% of colds are due tocoronaviruses


– Approximately 10% of colds are due to otherviruses

most antiviral drugs are ineffective against the common cold, but _______ ________ and ______ _______ blocking drugs have shown promise

pyrazidine derivatives and rhinovirus receptor

influenza

-Influenza is caused by an RNA virus of theorthomyxovirus group


There are three different types ofi nfluenzaviruses (A, B, C)


-Influenza A is the most important human pathogen


-outbreaks occur annually due to the plasticity of theinfluenza genome

Antigenic shift

Major change in influenza virus antigen due to gene reassortment

antigenic drift

Minor change in influenza virus antigens due to genemutation



prevention of influenza

immunization, careful worldwide surveilance

treatment of influenza

– Use of various drugs


– Most effective when administered early


– Aspirin should be avoided (anti coagulant anti platelet)


– Reyes Syndrome - no know cause

Airborne Pathogens

Aerosols are important for person-to-persontransmission of many infectious diseases




Most pathogens survive poorly in air, thus, areeffectively transmitted only over short distances

Respiratory infections

– Different pathogens characteristically colonize the respiratory tract at different levels


– The upper and lower respiratory tracts offerdifferent environments and favor differentmicrobes

upper respiratory tract

Staphylococcus aureus, Neisseria meningitidis, Streptococcus pyrogenes, Corynebacterium diphtheriae, Haemophilus influenzae

lower respiratory tract

Influenza virus, Coccidioides immitis, Bordetella pertussis, Streptococcus pneumoniae, Coxiella burnetii, Chlamydophila psittaci

Streptococcus pyogenes (group A Streptococcus;GAS)

– Commonly found in low numbers in the upperrespiratory tract of healthy individuals


– Causative agent of “strep throat”


– Can also cause infections of the inner ear,mammary glands, and skin


- Infections occur if host defenses are weakened ora new, highly virulent strain is introduced

Streptococcal Diseases

– Certain GAS strains carry a lysogenicbacteriophage that encodes exotoxins responsiblefor symptoms of toxic shock syndrome and scarletfever


– Untreated or insufficiently treated infections canlead to other diseases

rheumatic fever

autoimmunity due to molecularmimicry, anti bacterial antibodies cross react withheart

Definitive diagnosis of streptococcusstrains is by

culture Beta Hemolysis

Diphtheria

– A severe respiratory disease that typically infects children


– Caused by Corynebacterium diphtheriae (Fi• A bacterium that forms irregular rods during growth bowling pin


– Preventable and treatable

Corynebacterium diphtheriae

– Spreads by airborne droplets and enters the body via the respiratory route


– Previous infection or immunization provides resistance


– Pathogenic strains lysogenized by bacteriophage  produce apowerful exotoxin that causes


Tissue death


The appearance of the pseudomembrane in the patient’s throat

Diagnosis of Diphtheria

must be isolated from the throat

prevention diptheria

vaccine

treatment diptheria

– Antibiotics


– Diphtheria antitoxin* available for acute cases • Early administration necessary


• antibodies*

Pertussis (whooping cough)

– An acute, highly infectious respiratory disease


– Caused by infection with Bordetella pertussis


– Observed frequently in school-age children


– Characterized by a recurrent, violent cough


– There has been a consistent upward trend ofinfections since the 1980s


– Inadequately immunized children, adolescents,and adults are at high risk for acquiring andspreading pertussis

Diagnosis pertussis

– Made by fluorescent antibody staining of a nasopharyngeal swab specimen


– Also made by actual culture of the organism

Prevention

vaccination soon after birth

treatment

antibiotics, elimination is helped by the immune response

Staphylococcus

-a nonsporulating, gram-positive cocci that divides into several planes to form irregular clumps


-cause diseases including acne,boils,pimples,impetigo, pneumonia, osteomyelitis, carditis, meningitis, and arthritis


- Many diseases result from pyogenic(pus) infection or from theactions of staphylococcal superantigen exotoxins

pus formation

Leukocidin andenzymes lead to

fibrin formation

Coagulase




fibrin wallsoff infection

Helicobacter pylori

– A gram-negative, highly motile, spiral-shapedbacterium


Associated with gastritis, ulcers, andgastric cancers


– Colonizes the non-acid-secreting mucosa of thestomach and upper intestinal tract


– Transmitted via person-to-person contact oringestion of contaminated food or water


– Aussie DR Koch’s postulate experiment

H. Pylori: stomach symbiont

-Flagellated, helical


- Senses ph, produces Urease, increases acid?


-50% world colonized, 85% asymptomatic


- 80% of gastric, 90% of duodenal ulcers H pylori related


- Grehlin – “hungry” expression stops when stomach stretchedLeptin satiety


- Grehlin plasma levels increase in H pylori free


-BUT Grehlin low in obese individuals


- Eliminated in West due to antibiotics

Hepatitis

– Liver inflammation caused by viruses or bacteria


– Sometimes results in acute illness followed by destruction of liveranatomy and cells (cirrhosis)


– A restricted group of viruses is associated with liver disease


– Hepatitis viruses are diverse

Hepatitis A virus

infectious hepatitis




Causes mild or, rarely, severe cases of liver disease

Hepatitis B virus

serum hepatitis




Causes acute, often severe disease that can lead to liver failure and death

Hepatitis D virus

A defective virus that cannot replicate andexpress a complete virus unless the cell is alsoinfected with hepatitis B

Hepatitis C virus

Produces a mild disease initially, but mostindividuals develop chronic hepatitis that can leadto chronic liver disease

Hepatitis E virus

Causes an acute, self-limiting hepatitis that varies in severity





Hepatitis G virus

Causes very mild disease or is asymptomatic

Incidence and Prevalence of Hepatitis

– Decreased significantly in the U.S. in the last 20 years


– Viral hepatitis is still a major public healthproblem


• Due to the high infectivity of the viruses


and thelack of effective treatment options


– Vaccines are available for Hepatitis A and Bviruses

AIDS

– Recognized as a distinct disease in 1981


– Human immunodeficiency virus (HIV) is thecausative agent


– Urban Myths and the Anti-hater


– Accidental exposure without other riskfactors

HIV-1

the more virulent type

HIV-2

less virulent and causes a milder, AIDS-like disease

HIV Pathogenesis

– HIV infects cells that contain the CD4 cell surface protein


– Most commonly infected are macrophages andT-helper cells


– HIV also interacts with coreceptors on target cells


– RT mutation rates,The Berlin Patient




HIV infection does not immediately kill the host cell Infection results in a progressive decline in CD4 cells


As the number of CD4 cells declines, cytokineproduction falls, leading to reduction of the immuneresponse

HIV can be detected using:

HIV-EIA,HIV-immunoblot, or rapid tests

problem with HIV tests

These fail to detect infection in individuals whorecently acquired the HIV and have not made adetectable antibody window period

___-____ can detect HIV RNA directly from bloodand estimate the number of viruses present

RT-PCR




this is used for early detection and monitoring the progression

treatment HIV

• Highly active antiretroviral therapy (HAART)


• Drug combinations


• Nucleoside reverse transcriptase inhibitors


• Nonnucleoside reverse transcriptase inhibitors


• Protease inhibitors


• Fusion inhibitors


PreP Pre-Exposure Prophylaxsis


• Prevention as treatment

zoonosis

Animal disease transmissible to humans




Generally transmitted via direct contact, aerosols, or bites




lyme disease, malaria, west nile

Rickettsias

small bacteria that have strict intracellular existence invertebrates




Associated with bloodsucking arthropods


Three groups: (1) typhus group, (2) spotted fever group, and (3) ehrlichiosis group




Named for Howard Ricketts




Closely related to human mitochondria




Contain minimal sets of genes required for intracellular dependency

Typhus group

Transmitted by the body or head louse bite that gets contaminated withlouse feces




3 million deaths in WWI trench fever

Spotted fever group

• Transmitted by dog and wood ticks


• Over 2,000 people acquire the disease every year


• Rickettsia grow in nucleus and cytoplasm• Symptoms include headache, fever, and rash

Ehrlichiosis group

Emerging diseases are human granulocytic anaplasmosis (HGA) and humanmonocytic ehrlichiosis (HME), which are spread by tick bites




Flu-like symptoms include fever, headache, malaise, and leukopenia orthrombocytopenia


• Prompt recognition of these diseases is essential, but remains difficult


• Treatment with antibiotics is usually successful


• Avoiding hosts and using insect repellents are your best bets for reducingyour chances of exposure

Lyme disease

• Affects humans and other animals


• Old Lyme, Connecticut, was where cases were first recognized


• Most prevalent tickborne disease in the U.S.


• Caused by the spirochete Borrelia burgdorferi


• Spread primarily by the deer tick


• Powanuss virus new tick-borne




-Deer and white-footed field mouse are the prime mammalian reservoirs


- Also identified in Europe and Asia


- In U.S., most cases reported in the Northeast and upper Midwest


- Number of Lyme disease cases rising yearly

symptoms of lyme disease

headache,backache,chills,andfatigue


In75%of cases a large rash occurs at the site of the tick bite

initially can be treated with

antibiotics

chronic stage develops in weeks to months

-40–60% of these patients develop arthritis


- Others develop neurological damage or heart damage


- No toxins or virulence factors have been identified


• Chronic Lyme’s and Powanuss virus

Malaria

-A protist disease caused by Plasmodium spp.


- Has a complex life cycle that includes Anopheles mosquitoes as vectors


- Estimates of 350,000,000 people infected worldwide


- Each year over 1,000,000 people die from malaria


- Generally found in tropical and subtropical regions


• 3.5 B at risk


• 200M cases 400K deaths


• Preventive measures account forreduction

diagnosis of malaria

requires identification of Plasmodium-infected erythrocytes in blood smears

Some individuals in regions where malaria is endemic have sickle cell traitand other thlassemias that make them.....

immune to malaria

this was a mistake

halp

Humans are a dead end host for West Nile Virus.


Select one:True False

true

Streptococcus pneumoniae


Select one:


a. is surrounded by a polysaccaride capsule that makes phagocytosis very difficult.


b. is the only causative agent of pneumonia.


c. can only cause lung infections


d. is unlikely to infect immunocompromised patients

a

Which of the following is an obligate intra cellular pathogen.


Select one:


a. Streptococus


b. Ricksettia


c. plasmodium


d. a, b, c

b

Which of the following is/are reasons why a tick bite doesn't always lead to Lyme infection


Select one:


a. tick wasn't infected


b. tick fed for a short time


c. no bull's eye rash


d. a, b, c


e. a and b

d

Worldwide one of the most common causes of death in HIV positive patients is TB (tuberculosis)


Select one:


a. True
b. false


c. unknown

a

Factors that have led to an increase in nosocomical, or hospital-acquired infections, include ____


Select one:


a. a. lots of sick people


b. b. antibiotic over use


c. c invasive medical devices


d. d. a, b and c

d

In the DTaP vaccine, ‘a’ stands for Select one:


a. a. attenuated


b. b. acellular


c. c. antitoxin


d. d. antibody

b

Reverse transcriptase is a(n


)Select one:


a. RNA-dependent DNA polymerase.


b. DNA-dependent DNA polymerase.


c. RNA-dependent RNA polymerase.


d. DNA-dependent RNA polymerase.

a

Extensively drug resistant Tuberculosis (XDRTB) is considered_________________.


Select one:


a. a. a MDRO (a multi drug resistant organism)


b. b. a secondary infectionc.


c. a re-emerging pathogend.


d. a and c

d

Lyme disease is a zoonotic disease caused by a spirochete. t/f

true