Succinate Dehydrogenase Lab

Improved Essays
The aim of this experiment was to determine the enzymatic activity of succinate dehydrogenase (SDH) in various solutions, specifically those containing and not containing a reagent. The assigned reagent was malonate, which was previously hypothesized to be an inhibitor of SDH.
Bovine liver was manipulated primarily through centrifugation, and mitochondrial fractions were then created to serve as the enzyme-rich solutions the reagent would act upon. To determine the protein concentration of the mitochondrial fraction, the Bradford assay was implemented; the result will later be used in the calculation of the specific activity of SDH.
Ultimately, the SDH assay provided the data to either support or negate the hypothesis about malonate’s effect on SDH activity. This procedure involved testing tubes containing: potassium phosphate buffer, azide (to block the electron transport chain), buffered sucrose, mitochondrial extract, DCPIP (to accept the electrons from FADH2), succinate (the substrate for SDH), and malonate. These tubes were tested against tubes lacking the reagent malonate, a tube lacking SDH (boiled mitochondrial extract), a tube lacking
…show more content…
SDH plays a crucial role in the Krebs cycle and the electron transport chain, both components of cellular respiration occurring within the mitochondria. Basically, SDH, which consists of four subunits – A, B, C, and D, breaks down sugar and transfers electrons from FADH2 to the electron transport chain. The process begins with the Krebs cycle, in which succinate in its reduced form is oxidized to fumarate. FAD is then reduced to FADH2 as it accepts the extra hydrogen molecules from the oxidation of succinate to fumarate. Both of these reactions are catalyzed by SDH. The electrons from FADH2 are then passed to ubiquinone, then down the electron transport chain (Rustin, et al.,

Related Documents

  • Decent Essays

    The reasons why kidney and skeletal muscle chosen for the kinetic analysis of LDH: Lactate dehydrogenase (LDH) is the enzyme that coverts high level lactate to pyruvate and maintain equilibrium level in skeletal muscle. In the abive case Lactate dehydrogenase action is completely correlated to the muscular fatigue. The production of lactic acid during severe excerise or heavy work load is leading to muscle fatigue. Normally at rest means the excess lactate converted to pyruvate . Usually LDH reduces lactate level by various ways by generating NAD+ with glyceradehyde -3-phophate and also by promoting ATP energy production through second period of glycolytic phase to the muscle cells under heavy work loads in skeletal muscle.…

    • 382 Words
    • 2 Pages
    Decent Essays
  • Great Essays

    The citric acid cycle produces energy by the oxidation of acetyl coenzyme A (acetyl CoA) to carbon dioxide (CO2) and ATP 3, 5, 7. Acetyl CoA can be synthesised from carbohydrates, fatty acids and amino acids.1, 5, 7. Pyruvate produced in glycolysis undergoes oxidation and decarboxylation by the multi enzyme complex pyruvate dehydrogenase to produce acetyl CoA. 7, 8, 10. The citric acid cycle also provides carbon skeletons for the biosynthesis of amino acids, fatty acids, carbohydrates, cholesterol, haeme and other molecules that are vital for survival. 1, 5, 6,…

    • 1500 Words
    • 6 Pages
    Great Essays
  • Improved Essays

    Demonstration of Cellular Respiration Inside Lima Beans Cells in Vitro Purpose: Cellular respiration is a series of metabolic reactions that take place in the mitochondria and produce chemical energy in the form of ATP by the breakdown of food molecules. There are three processes involved in cellular respiration; glycolysis, the Krebs cycle and the electron transport chain. During this processes, glucose is oxidized by a series of redox reactions and its electrons and hydrogen ions are donated to two electron carriers called NAD+ and FAD.…

    • 776 Words
    • 4 Pages
    Improved Essays
  • Superior Essays

    By reducing LDH-5, mitochondrial respiration declines resulting in slow cell proliferation. (LDH-5 4) Furthermore, LDH can be used as a clinical marker to detect cellular damage in the blood.…

    • 721 Words
    • 3 Pages
    Superior Essays
  • Improved Essays

    In Biology in the Laboratory, this is confirmed by the section concerning the effect substrate concentration has on activity (Helms et al,. 1998). Conclusion 1. For the catechol enzyme, the optimal pH is 8 and temperature desired in order to function effectively is near near room temperature. 2.…

    • 753 Words
    • 4 Pages
    Improved Essays
  • Improved Essays

    Introduction: Enzymes have a huge effect on the human body and other organisms. Enzymes are catalysts that are used to accelerate the reaction process by lowering the activation energy. For this experiment the catechol oxidase was extracted from potatoes. The enzyme is called catechol oxidase because the oxygen is reacting to catechol. Catechol oxidase causes the browning of the fruits and vegetables because the compound is toxic to the bacteria.…

    • 1142 Words
    • 5 Pages
    Improved Essays
  • Improved Essays

    Riboflavin Research Paper

    • 441 Words
    • 2 Pages

    There is a variety of amino acid residues that take part in covalent binding of flavin coenzymes to enzymes. The ribitol moiety does not take part in the redox function of flavin coenzymes. The stereochemistry and nature of the sugar alcohol, both are considered important. Some riboflavin analogs are partially active and most are inactive or having antivitamin activity, but in microbiological assays they may be active. Riboflavin is heat stable but easily degraded by light.…

    • 441 Words
    • 2 Pages
    Improved Essays
  • Superior Essays

    Students then added 1.5ml of the supernatant in two different microcentrifuge tubes labeled “post- mitochondria.” The rest of the supernatant was placed in a test tube labeled “post mitochondria” for use in activity A4. The pellet was re-suspended after 4.0ml of homogenization buffer was added. 1.5ml of this solution was placed in two different microcentrifuge tubes labeled “mitochondria.” The remaining solution was appropriately thrown…

    • 1043 Words
    • 5 Pages
    Superior Essays
  • Improved Essays

    Pymol Isoenzymes

    • 783 Words
    • 4 Pages

    The general aim of the study was to use Pymol to analyse molecular graphics of the isoenzymes carbonic anhydrase (CA) I and II, CA substrates (e.g. bicarbonate), and CA selective inhibitors (e.g., sulfonamides) to determine the relationship between CA structure and function. The specific aim of the study, described in part (ii), was to use Pymol to analyse molecular graphics of CA-I, and II, to determine relationship between structure and function and then use the results to analyse how one of the thienothiopyran-2-sulfonamides, 4-amino-5,6-dihydro-6-methyl-4H-thienothiopyran-2-sulfonamide (PTS), is a selective inhibitor of CA-II. (ii) Brief Account of How Sulfonamide Inhibitors are Isoenzyme-Selective (Problem V) The present study investigated how PTS can selectively inhibit CA-II, and not CA-I.…

    • 783 Words
    • 4 Pages
    Improved Essays
  • Decent Essays

    A Summary Of Malonate

    • 167 Words
    • 1 Pages

    Any agent that interferes with enzyme activity is an inhibitor. Inhibitors can affect the catalysis and/or the binding of enzymes to substrate. (McMichael) Malonate is an inhibitor of SDH mainly because of its shape and function. The shape is similar to that of succinate. (Clark, 2009)…

    • 167 Words
    • 1 Pages
    Decent Essays
  • Decent Essays

    Fig. 2 Ragged-blue fibers, succcinate dehydrogenase (SDH) hyperreactive or simply SDH+ fibers are shown on A-B. Nicotinamide adenine dinucleotide tetrazolium reductase (NADH-TR) hyperreactive fibers are shown on C, but they are less specific due to mitochondria and sarcoplasmatic reticulum stain activity. Oil red O (ORO) hyperreactive fibers with intense lipid droplets are shown in…

    • 55 Words
    • 1 Pages
    Decent Essays
  • Decent Essays

    The study of the metabolic process and enzyme kinetics is a key part of biochemistry and particular interest is shown in the analysis of succinate dehydrogenase in this experiment. Succinate dehydrogenase (SDH) is an enzyme which is implanted within the mitochondrial inner membrane. SDH is in charge of catalysing the oxidation of succinate with its co enzyme flavin adeninie dinucleotide (FAD) (often represented as E-FAD) from succinate to fumarate,(Hollywood, 2010)…

    • 70 Words
    • 1 Pages
    Decent Essays
  • Improved Essays

    Table 1 depicts the Velocity of DCIP being reduced by SDH. Table 2 shows a comparison between SDH assay and the images perceived from the microscopy. When looking at table 2, it was seen that Nuclei and mitochondria were only located in the filtrate. S1 contained mostly mitochondria, while P1 contained mostly mitochondria. S2 had some mitochondria while P2 had a majority of mitochondria.…

    • 608 Words
    • 3 Pages
    Improved Essays
  • Decent Essays

    Malonate is a salt or ester of malonic acid, usually found in small amounts in plants and produced by some bacteria. There are two forms in the environment: dimethyl and diethyl. Most of the environmental malonate comes from industrial production. Few strains of bacteria are able to utilize the decarboxylation of malonate to acetate as a source of carbon and energy. (Caspi 2013)…

    • 242 Words
    • 1 Pages
    Decent Essays
  • Improved Essays

    By calculating the rate of reaction and studying the effects of varied conditions on the reaction, a great deal can be learnt about the enzyme, including how the enzyme could be inhibited, the catalytic mechanism of the enzyme etc. One of the most well-known ways to look at enzyme kinetics is the Michaelis-Menton equation, which relates reaction rate (V) to concentration of substrate ([S]). Its equation can be used to work out the maximum rate of reaction of the system (Vmax) and the substrate concentration at which the reaction rate is half of Vmax (Km, also known as the Michaelis constant). Michaelis-Menton shows that the rate of reaction is dependent of the rate of formation of the enzyme-substrate complex and rate of formation of the product. This means that in the enzyme assay, the rate of reaction is dependent on the formation of NAD+ from NADH (Scopes, R.,…

    • 1627 Words
    • 7 Pages
    Improved Essays