This early work used what are called local methods to calculate related mutations from protein sequences, however suffered from indirect false correlations that result from treating every pair of residues as independent of all alternative pairs.In 2011, a distinct, and this time world applied mathematics approach, demonstrated that predicted coevolved residues were adequate to predict the 3D fold of a protein, providing there are enough sequences out there.The method, EVfold, uses no homology modeling, threading or 3D structure fragments and might be run on a regular personal computer even for proteins with many residues. The accuracy of the contacts predicted using this and related approaches has currently been incontestible on several best-known structures and make contact with maps, as well as the prediction of experimentally unsolved transmembrane
This early work used what are called local methods to calculate related mutations from protein sequences, however suffered from indirect false correlations that result from treating every pair of residues as independent of all alternative pairs.In 2011, a distinct, and this time world applied mathematics approach, demonstrated that predicted coevolved residues were adequate to predict the 3D fold of a protein, providing there are enough sequences out there.The method, EVfold, uses no homology modeling, threading or 3D structure fragments and might be run on a regular personal computer even for proteins with many residues. The accuracy of the contacts predicted using this and related approaches has currently been incontestible on several best-known structures and make contact with maps, as well as the prediction of experimentally unsolved transmembrane